Publications 2018

Title Author Reference Year Url / DOI
2D polarization imaging as a low-cost fluorescence method to detect α-synuclein aggregation ex vivo in models of Parkinson’s disease Camacho, R., Täuber, D., Hansen, C. et al. Commun. Biol. 1, 157 2018 https://doi.org/10.1038/s42003-018-0156-x
3D Biomimetic Chips for Cancer Cell Migration in Nanometer-Sized Spaces Using “Ship-in-a-Bottle” Femtosecond Laser Processing Sima, F., H. Kawano, A. Miyawaki, L. Kelemen, P. Ormos, D. Wu, J. Xu, K. Midorikawa, K. Sugioka ACS Appl. Bio Mater. 1, 1667-1676 2018 https://doi.org/10.1021/acsabm.8b00487
A bio-inspired design of live cell biosensors Marcek Chorvatova, A., T. Teplicky, Z. Pavlinska, Z. Kronekova, D. Trelova, F. Razga, V. Nemethova, L. Uhelska, I. Lacik, D. Chorvat Proc. SPIE 10506, 105060R 2018 https://doi.org/10.1117/12.2288789
An “in-fiber” Whispering-Gallery-Mode bi-sphere resonator, sensitive to nanometric displacements Kosma, K., Schuster, K., Kobelke, J. et al. Appl. Phys. B 124, 1 2018 https://doi.org/10.1007/s00340-017-6866-9
Biological Action in and out of the Water Window Vyšín, L., M. Davídková, P. Wachulak, H. Fiedorowicz, A. Bartnik, M. Krůs, M. Kozlová, J. Skála, J. Dostál, R. Dudžák and L. Juha Acta Physica Polonica A 133, 236 2018 https://doi.org/10.12693/APhysPolA.133.236
Broadband (550–1350 nm) diffuse optical characterization of thyroid chromophores Konugolu Venkata Sekar, S., A. Farina, A. Dalla Mora, C. Lindner, M. Pagliazzi, M. Mora, G. Aranda, H. Dehghani, T. Durduran, P. Taroni & A. Pifferi Sci. Rep. 8, 10015 2018 https://doi.org/10.1038/s41598-018-27684-8
Clinical Translation of a Novel Photoacoustic Imaging System for Examining the Temporal Artery Sheikh, R., M. Cinthio, U. Dahlstrand et al. IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control 66, 472-480 2018 https://doi.org/10.1109/TUFFC.2018.2868674
Compact system for near edge X-ray fine structure (NEXAFS) spectroscopy using a laser-plasma light source Wachulak, P., M. Duda, A. Bartnik, A. Sarzyński, Ł. Węgrzyński, M. Nowak, A. Jancarek, and H. Fiedorowicz Opt. Express 26, 8260-8274 2018 https://doi.org/10.1364/OE.26.008260
Computer simulation analysis of source‐detector position for percutaneously measured O2‐gas signal in a three‐dimensional preterm infant lung Liao, P., J. Larsson, E.K. Svanberg, P. Lundin, J. Swartling, M. Lewander Xu, J. Bood, S. Andersson‐Engels J. Biophotonics 11, e201800023 2018 https://doi.org/10.1002/jbio.201800023
Differential loss magnetic field sensor using a ferrofluid encapsulated D-shaped optical fiber Violakis, G., N. Korakas, and S. Pissadakis Opt. Lett. 43, 142-145 2018 https://doi.org/10.1364/OL.43.000142
Dissecting myosin-5B mechanosensitivity and calcium regulation at the single molecule level Gardini, L., S.M. Heissler, C. Arbore, Y. Yang, J.R. Sellers, F.S. Pavone & M. Capitanio Nature Communications 9, 2844 2018 https://doi.org/10.1038/s41467-018-05251-z
Electro-optic deflectors deliver advantages over acousto-optical deflectors in a high resolution, ultra-fast force-clamp optical trap Woody, M.S., M. Capitanio, E. M. Ostap, and Y. E. Goldman Opt. Express 26, 11181-11193 2018 https://doi.org/10.1364/OE.26.011181
Excitation-multiplexed multicolor superresolution imaging with fm-STORM and fm-DNA-PAINT Gómez-García, P.A., E.T. Garbacik, J.J. Otterstrom, M.F. Garcia-Parajo, and M. Lakadamyali PNAS 115, 12991-12996 2018 https://doi.org/10.1073/pnas.1804725115
Fast microplastics identification with stimulated Raman scattering microscopy Zada, L., H.A. Leslie, A.D. Vethaak, G.H. Tinnevelt, J.J. Jansen, J.F. de Boer, F. Ariese J. Raman Spectroscopy 49, 1136 2018 https://doi.org/10.1002/jrs.5367
Force and Calcium Regulation of a Single Myosin-5B Motor Gardini, L., S.M. Heissler, C. Arbore et al. Biophysical J. 114, 321a 2018 https://doi.org/10.1016/j.bpj.2017.11.1805
Frequency-Encoded Multicolor Fluorescence Imaging with Single-Photon-Counting Color-Blind Detection Garbacik, E.T., M. Sanz-Paz, K.J.E. Borgman, F. Campelo, M.F. Garcia-Parajo Biophysical J. 115, 725-736 2018 https://doi.org/10.1016/j.bpj.2018.07.008
High resolution combined molecular and structural optical imaging of colorectal cancer in a xenograft mouse model Feroldi, F., M. Verlaan, H. Knaus, V. Davidoiu, D.J. Vugts, G.A.M.S. van Dongen, C.F.M. Molthoff, and J.F. de Boer Biomed. Opt. Express 9, 6186-6204 2018 https://doi.org/10.1364/BOE.9.006186
High-Speed Optical Tweezers for the Study of Single Molecular Motors Gardini L., Tempestini A., Pavone F.S., Capitanio M. Molecular Motors 1805, 151-184 2018 https://doi.org/10.1007/978-1-4939-8556-2_9
Hyperuniformity in amorphous speckle patterns Di Battista, D., D. Ancora, G. Zacharakis, G. Ruocco, and M. Leonetti Opt. Express 26, 15594-15608 2018 https://doi.org/10.1364/OE.26.015594
Identification of tumor margins using diffuse reflectance spectroscopy with an extended‐wavelength spectrum in a porcine model Dahlstrand, U., R. Sheikh, C. D. Nguyen, J. Hult, N. Reistad, M. Malmsjö Skin Res. Technol. 24, 667-671 2018 https://doi.org/10.1111/srt.12583
In vivo time-gated diffuse correlation spectroscopy at quasi-null source-detector separation M. Pagliazzi, S. Konugolu Venkata Sekar, L. Di Sieno, L. Colombo, T. Durduran, D. Contini, A. Torricelli, A. Pifferi, and A. Dalla Mora Opt. Lett. 43, 2450-2453 2018 https://doi.org/10.1364/OL.43.002450
Intraoperative liver steatosis characterization using diffuse reflectance spectroscopy Reistad, N., J.H. Nilsson, M. Bergenfeldt, P. Rissler, C. Sturesson HPB 21, 175-180 2018 https://doi.org/10.1016/j.hpb.2018.06.1809
Large-conductance Ca2+-activated potassium channels are potently involved in the inverse neurovascular response to spreading depolarization Menyhárt, A., A.E. Farkas, D.P. Varga, R. Frank, R. Tóth, A.R. Bálint, P. Makra, J.P.Dreier, F. Bari, I.A. Krizbai, E. Farkas Neurobiology of Disease 119, 41-52 2018 https://doi.org/10.1016/j.nbd.2018.07.026
Light and oxygen induce chain scission of conjugated polymers in solution Louis, B., S. Caubergh, P.-O. Larsson, Y. Tian and I. G. Scheblykin Phys. Chem. Chem. Phys. 20, 1829-1837 2018 https://doi.org/10.1039/C7CP07347J
Liquid phantoms for near-infrared and diffuse correlation spectroscopies with tunable optical and dynamic properties Cortese, L., G. Lo Presti, M. Pagliazzi, D. Contini, A. Dalla Mora, A. Pifferi, S. Konugolu Venkata Sekar, L. Spinelli, P. Taroni, M. Zanoletti, U.M. Weigel, S. de Fraguier, A. Nguyen-Dihn, B. Rosinski, and T. Durduran Biomed. Opt. Express 9, 2068-2080 2018 https://doi.org/10.1364/BOE.9.002068
Modification of Polymer Substrates with Extreme Ultraviolet — Potential Application in Cancer Cell Identification Ahad, I.U., J. Pabijan, K. Pogoda, C. Hughes, A. Bartnik, H. Fiedorowicz, M. Lekka and D. Brabazon Acta Physica Polonica A 133, 283-285 2018 https://doi.org/10.12693/APhysPolA.133.283
Multimodal auto-fluorescence detection of cancer: from single cells to living organism Horilova, J., B. Cunderlikova, M. Cagalinec, D. Chorvat, A. Marcek Chorvatova Proc. SPIE 10498, 104980G 2018 https://doi.org/10.1117/12.2288785
Optical projection tomography via phase retrieval algorithms Ancora, D., D. Di Battista, G. Giasafaki, S.E. Psycharakis, E. Liapis, J. Ripoll, G. Zacharakis Methods 136, 81-89 2018 https://doi.org/10.1016/j.ymeth.2017.10.009
Optimization of Highly Inclined Optical Sheet Illumination for Super-Resolution Microscopy Vignolini, T., L. Gardini, V. Curcio, M. Capitanio, F. S. Pavone Biophysical J. 114, 14a 2018 https://doi.org/10.1016/j.bpj.2017.11.121
Photoacoustic signal attenuation analysis for the assessment of thin layers thickness in paintings Tserevelakis, G.J., A. Dal Fovo, K. Melessanaki, R. Fontana and G. Zacharakis J. Appl. Phys. 123, 123102 2018 https://doi.org/10.1063/1.5022749
PLANT: A Method for Detecting Changes of Slope in Noisy Trajectories Sosa-Costa, A., I.K. Piechocka, L. Gardini et al. Biophysical J. 114, 2044-2051 2018 https://doi.org/10.1016/j.bpj.2018.04.006
Preparation of metal nanoparticles by femtosecond laser ablation Teplicky, T., D. Chorvat, M. Michalka and A. Marcek Chorvatova Nova Biotechnol. Chim. 17, 38-47 2018 https://doi.org/10.2478/nbec-2018-0004
Quantifying the Proteolytic Cleavage of Plasma Membrane Proteins in Living Cells Calamai, M., F. S. Pavone Curr. Protoc. Cell Biol. 81, e58 2018 https://doi.org/10.1002/cpcb.58
Real time dynamics of β-catenin expression during Hydra development, regeneration and Wnt signalling activation Iachetta, R., A. Ambrosone, A. Klimovich et al. Int. J. Dev. Biol. 62, 311 - 318 2018 https://doi.org/10.1387/ijdb.180092ct
Ring-Airy beams at the wavelength limit Manousidaki, M., V. Yu. Fedorov, D.G. Papazoglou, M. Farsari, and S. Tzortzakis Opt. Lett. 43, 1063-1066 2018 https://doi.org/10.1364/OL.43.001063
Sliding of a single lac repressor protein along DNA is tuned by DNA sequence and molecular switching Tempestini, A., C. Monico, L. Gardini, F. Vanzi, F.S. Pavone, M. Capitanio Nucleic Acids Res., gky208 2018 https://doi.org/10.1093/nar/gky208
Spectrally and Spatially Resolved Laser-Induced Photobleaching of Endogenous Flavin Fluorescence in Cardiac Myocytes Marcek Chorvatova, A., J. Kirchnerova, M. Cagalinec, A. Mateasik, D. Chorvat Jr. Cytometry Part A 95, 13 2018 https://doi.org/10.1002/cyto.a.23591
Split-Face, Randomized, Placebo-Controlled, Double-Blind Study to Investigate Passive Versus Active Dermal Filler Administration Freire dos Santos, M. J., R. Carvalho, L. G. Arnaut Aesth. Plast. Surg. 42, 1655 2018 https://doi.org/10.1007/s00266-018-1208-9
Stimulated Raman scattering microscopy with long wavelengths for improved imaging depth Moester, M.J.B., L. Zada, B. Fokker, F. Ariese, J.F. de Boer J. Raman Spectrosc. 50, 1321-1328 2018 https://doi.org/10.1002/jrs.5494
The Raman and SERS spectra of indigo and indigo-Ag2 complex: DFT calculation and comparison with experiment Ricci, M., C. Lofrumento, M. Becucci, E. M. Castellucci Spectroc. Acta A 188, 141-148 2018 https://doi.org/10.1016/j.saa.2017.06.036
Three-dimensional femtosecond laser processing for lab-on-a-chip applications Sima, F., Sugioka, K., Vázquez, R., et al. Nanophotonics 7, 613-634 2018 https://doi.org/10.1515/nanoph-2017-0097
Three-Dimensional Tracking of Quantum Dot-Conjugated Molecules in Living Cells Gardini, L., M. Calamai, H. Hatakeyama, M. Kanzaki, M. Capitanio, F.S. Pavone Nanoscale Imaging. Methods in Molecular Biology 1814, 425-448 2018 https://doi.org/10.1007/978-1-4939-8591-3_26
Uncovering the hidden content of layered documents by means of photoacoustic imaging Tserevelakis, G.J., M. Tsagkaraki, P. Siozos, G. Zacharakis STRAIN 55, e12289 2018 https://doi.org/10.1111/str.12289