Publications 2014

Title Author Reference Year Url / DOI
3D Microporous Scaffolds Manufactured via Combination of Fused Filament Fabrication and Direct Laser Writing Ablation Malinauskas, M.; Rekštytė, S.; Lukoševičius, L.; Butkus, S.; Balčiūnas, E.; Pečiukaitytė, M.; Baltriukienė, D.; Bukelskienė, V.; Butkevičius, A.; Kucevičius, P.; Rutkūnas, V.; Juodkazis, S. Micromachines 5, 839-858 2014 http://dx.doi.org/10.3390/mi5040839
A Microfluidic Platform for Correlative Live-Cell and Super-Resolution Microscopy Tam, J. et al. PLoS One 9, e115512 2014 http://dx.doi.org/10.1371/journal.pone.0115512
Anticancer phototherapy using activation of E-combretastatins by two-photon–induced isomerization Scherer, KM et al. J. Biomed. Opt. 20, 051004 2014 http://dx.doi.org/10.1117/1.JBO.20.5.051004
Augmentation of direct laser writing fabrication throughput for three-dimensional structures by varying focusing conditions Jonušauskas, L., S. Rekštytė, M. Malinauskas Opt. Eng. 53, 125102 2014 http://dx.doi.org/10.1117/1.OE.53.12.125102
Bone tissue phantoms for optical flowmeters at large interoptode spacing generated by 3D-stereolithography Binzoni, T., A. Torricelli, R. Giust, B. Sanguinetti, P. Bernhard, and L. Spinelli Biomed. Opt. Express 5, 2715-2725 2014 https://doi.org/10.1364/BOE.5.002715
Broadband photon time-of-flight spectroscopy as a prospective tool in biomedicine and industrial process and quality control Khoptyar, D. et al. Spectroscopy Europe 26, 6 2014 http://www.spectroscopyeurope.com/articles/55-articles/3351-broadband-photon-time-of-flight-spectroscopy-as-a-prospective-tool-in-biomedicine-and-industrial-process-and-quality-controlg
Capturing the Optical Phase Response of Nanoantennas by Coherent Second-Harmonic Microscopy Accanto, N. et al. Nano Lett. 14, 4078 2014 http://dx.doi.org/10.1021/nl501588r
Characterization of collagen and cholesterol deposition in atherosclerotic arterial tissue using non-linear microscopy Cicchi, R. et al. J. Biophoton. 7, 135-143 2014 http://dx.doi.org/10.1002/jbio.201300055
Coherent signal composition and global phase determination in signal multiplexed polarization sensitive optical coherence tomography J. Li, J.F. de Boer Opt. Express 22, 21382-21392 2014 http://dx.doi.org/10.1364/OE.22.021382
Combining single-molecule manipulation and imaging for the study of protein-DNA interactions Monico, C. et al. J. Vis. Exp. 90, e51446 2014 http://dx.doi.org/10.3791/51446
Correcting spherical aberrations in confocal light sheet microscopy: A theoretical study Silvestri, L. et al. Microsc. Res. Techniq. 77, 483-491 2014 http://dx.doi.org/10.1002/jemt.22330
Correlative two-photon and light sheet microscopy Silvestri, L. et al. Methods 66, 268-272 2014 http://dx.doi.org/10.1016/j.ymeth.2013.06.013
Cross-Talk-Free Multi-Color STORM Imaging Using a Single Fluorophore Tam, J. et al. PLoS One 9, e101772 2014 http://dx.doi.org/10.1371/journal.pone.0101772
Defects in T-tubular electrical activity underlie local alterations of calcium release in heart failure Crocini, C. et al. PNAS 111, 15196 2014 http://dx.doi.org/10.1073/pnas.1411557111
Design and validation of a fiber optic point probe instrument for therapy guidance and monitoring Xie, H. et al. J. Biomed. Opt. 19, 71408 2014 http://dx.doi.org/10.1117/1.JBO.19.7.071408
Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink Spinelli, L. et al. Biomed. Opt. Express 5, 2037 2014 http://dx.doi.org/10.1364/BOE.5.002037
Diffuse correlation spectroscopy for non-invasive, micro-vascular cerebral blood flow measurement Durduran, T., A.G. Yodh Neuroimage 85, 51-63 2014 http://dx.doi.org/10.1016/j.neuroimage.2013.06.017
Diffuse optics using a dual window fast-gated counter Sieno, L., A. Mora, G. Boso, A. Tosi, A. Pifferi, R. Cubeddu, and D. Contini Appl. Opt. 53, 7394-7401 2014 http://dx.doi.org/10.1364/AO.53.007394
Dinuclear Ruthenium(II) Complexes as Two-Photon, Time-Resolved Emission Microscopy Probes for Cellular DNA Baggaley E. et al. Angew. Chem. Int. Ed. 53, 3367 2014 http://dx.doi.org/10.1002/anie.201309427
Enhanced receptor-clathrin interactions induced by N-glycan-mediated membrane micropatterning. Torreno-Pina, J. A. et al. PNAS 111, 11037 2014 http://dx.doi.org/10.1073/pnas.1402041111
Estimate of tissue composition in malignant and benign breast lesions by time-domain optical mammography Quarto, G. et al. Biomed. Opt. Express 5, 3684 2014 http://dx.doi.org/10.1364/BOE.5.003684
Extreme ultraviolet and soft X-ray microscopy using a compact gas puff target laser-plasma sources Wachulak, P.W. et al. Microscopy: advances in scientific research and education, A. Méndez-Vilas (Ed.) 2014 978-84-942134-4-1
Fast monitoring of in-vivo conformational changes in myosin using single scan polarization-SHG microscopy Psilodimitrakopoulos, S. et al. Biomed. Opt. Express 5, 4362-4373 2014 http://dx.doi.org/10.1364/BOE.5.004362
Forward solvers for photon migration in the presence of highly and totally absorbing objects embedded inside diffusive media Sassaroli, A., et al. JOSA A 31, 460-469 2014 http://dx.doi.org/10.1364/JOSAA.31.000460
Fourier transform holography with extended references using a coherent ultra-broadband light source Tenner, V.T. et al. Opt. Express 22, 25397-25409 2014 http://dx.doi.org/10.1364/OE.22.025397
Functional cardiac imaging by random access microscopy Crocini, C. et al. Front. Physiol. 5, 403 2014 http://dx.doi.org/10.3389/fphys.2014.00403
GM1 and GM2 gangliosides: recent developments Bisel, B., Pavone, F.S., Calamai, M. Biomol. Concepts 5, 87-93 2014 http://dx.doi.org/10.1515/bmc-2013-0039
Hardware simulator for optical correlation spectroscopy with Gaussian statistics and arbitrary correlation functions Molteni M, UM Weigel, F Remiro, Durduran T, and F Ferri Opt. Express 22, 28002-18 2014 http://dx.doi.org/10.1364/OE.22.028002
Hybrid Photonic Antennas for Subnanometer Multicolor Localization and Nanoimaging of Single Molecules Mivelle, M. et al. Nano Lett. 14, 4895 2014 http://dx.doi.org/10.1021/nl502393b
Imaging in nanoscale using laser-plasma sources of extreme ultraviolet (EUV) Wachulak, P.W., A. Bartnik, A. Baranowska-Korczyc, D. Pánek, P. Bruža, J. Kostecki, Ł. Wegrzynski, R. Jarocki, M. Szczurek, K. Fronc, D. Elbaum, and H. Fiedorowicz Springer Proc. in Physics 147, 269 2014 https://doi.org/10.1007/978-3-319-00696-3_43
Impact of detubulation on force and kinetics of cardiac muscle contraction Ferrantini, C. et al. J. Gen. Physiol. 143, 783-97 2014 http://dx.doi.org/10.1085/jgp.201311125.
In vivo imaging of neural reactive plasticity after laser axotomy in cerebellar cortex Allegra Mascaro, A. L. et al. Proc. SPIE 8928, 89281N 2014 http://dx.doi.org/10.1117/12.2037276
In vivo non-invasive monitoring of collagen remodelling by two-photon microscopy after micro-ablative fractional laser resurfacing Cicchi, R., D. Kapsokalyvas, M. Troiano, P. Campolmi, C. Morini, D. Massi, G. Cannarozzo, T. Lotti,and F. S. Pavone J. Biophoton. 7, 914–925 2014 http://dx.doi.org/10.1002/jbio.201300124
Investigation of in-vivo skin autofluorescence lifetimes under long-term cw optical excitation Lihachev, A. et al. Quantum Electron. 44, 770 2014 http://dx.doi.org/10.1070/QE2014v044n08ABEH015483
Irradiation with EMOLED improves the healing process in superficial skin wounds Cicchi, R., F. Rossi, F. Tatini, S. Bacci, G. De Siena, D. Alfieri, R. Pini, and F. S. Pavone Proc. SPIE 8926, 892604 2014 http://dx.doi.org/10.1117/12.2037014
Large-scale automated identification of mouse brain cells in confocal light sheet microscopy images Frasconi, P. et al. Bioinformatics 30, i587-i593 2014 http://dx.doi.org/10.1093/bioinformatics/btu469
Laser nanosurgery of cerebellar axons in vivo Allegra Mascaro, A.L., Sacconi, L., Pavone F. J. Vis. Exp. 89, e51371 2014 http://dx.doi.org/10.3791/51371
Lensless diffractive imaging with ultra-broadband table-top sources: from infrared to extreme-ultraviolet wavelengths Witte, S. et al. Light-Sci. Appl. 3, e163 2014 http://dx.doi.org/10.1038/lsa.2014.44
Lensless phase contrast microscopy based on multiwavelength Fresnel diffraction Noom, D.W.E. et al. Opt. Lett. 39, 193-196 2014 http://dx.doi.org/10.1364/OL.39.000193
Light diffusion in quenched disorder: Role of step correlations Svensson, T. et al. Phys. Rev. E 89, 022141 2014 http://dx.doi.org/10.1103/PhysRevE.89.022141
Localization of single biological molecules out of the focal plane Gardini, L. et al. Proc. SPIE 8950, 895019 2014 http://dx.doi.org/10.1117/12.2039369
Long-lived excited states in i-motif DNA studied by picosecond time-resolved IR spectroscopy Keane PM et al. Chem. Commun. 50, 2990-2992 2014 http://dx.doi.org/10.1039/C3CC46594B
Long-lived metal complexes open up microsecond lifetime imaging microscopy under multiphoton excitation: from FLIM to PLIM and beyond Baggaley, E. et al. Chem. Sci. 5, 879-886 2014 http://dx.doi.org/10.1039/c3sc51875b
Mechanics of protein-DNA interaction studied with ultra-fast optical tweezers Monico, C., et al. Proc. SPIE 9129, 91291X 2014 http://dx.doi.org/10.1117/12.2052545
Microconical silicon structures influence NGF-induced PC12 cell morphology Simitzi, C., E. Stratakis, C. Fotakis, I. Athanassakis and A. Ranella J. Tissue Eng. Regen. Med. 2014 http://dx.doi.org/10.1002/term.1853
Microvascular versus Macrovascular Cerebral Vasomotor Reactivity in Patients with Severe Internal Carotid Artery Stenosis or Occlusion Zirak P, R Delgado-Mederos, L Dinia, J Martí-Fàbregas, and Durduran T Academic Radiology 21, 168 2014 http://dx.doi.org/10.1016/j.acra.2013.10.010
Multimodal fiber probe spectroscopy for tissue diagnostics applications: a combined Raman-fluorescence approach Cicchi, R., S. Anand, S. Rossari, A. Sturiale, F. Giordano, V. De Giorgi, V. Maio, D. Massi, G. Nesi, A. M. Buccoliero, F. Tonelli, R. Guerrini, N. Pimpinelli, and F. S. Pavone Proc. SPIE 8939, 89390U 2014 http://dx.doi.org/10.1117/12.2037024
Multimodal nonlinear imaging of atherosclerotic plaques differentiation of triglyceride and cholesterol deposits Matthäus, C. et al., J. Innov. Opt. Health Sci. 7, 1450027 2014 http://dx.doi.org/10.1142/S1793545814500278
Multimodal nonlinear microscopy: a powerful label-free method for supporting standard diagnostics on biological tissues Cicchi, R., and F. S. Pavone J. Innov. Opt. Health Sci. 7, 1330008 2014 http://dx.doi.org/10.1142/S1793545813300085
Nanoantenna enhanced emission of light-harvesting complex 2: the role of resonance, polarization, and radiative and non-radiative rates Wientjes, E. et al. Phys. Chem. Chem. Phys. 16, 24739-24746 2014 http://dx.doi.org/10.1039/C4CP03636K
Nanoclustering as a dominant feature of plasma membrane organization Garcia-Parajo, M.F. et al. J. Cell Sci. 127, 4995–5005 2014 http://dx.doi.org/10.1242/jcs.146340
Neurophotonics: non-invasive optical techniques for monitoring brain functions Torricelli, A., et al. Funct. Neurol. 29, 223-230 2014 http://dx.doi.org/10.11138/FNeur/2014.29.4.223
Non-linear imaging and characterization of atherosclerotic arterial tissue using combined two photon fluorescence, second-harmonic generation and CARS microscopy Cicchi, R., C. Matthäus, T. Meyer, A. Lattermann, B. Dietzek, B. R. Brehm, J. Popp, and F. S. Pavone Proc. SPIE 8948, 894807 2014 http://dx.doi.org/10.1117/12.2037018
Noninvasive characterization of the healthy human manubrium using diffuse optical spectroscopies Farzam P, C Lindner, U M Weigel, M Suarez, A Urbano-Ispizua, and Durduran T Physiol. Meas. 35, 1469 2014 http://dx.doi.org/10.1088/0967-3334/35/7/1469
Oncology Applications: Optical Diagnostics of Cancer Chorvatova A. and Chorvat D. Fluorescence Lifetime Spectroscopy and Imaging, 325-343 2014 http://dx.doi.org/10.1201/b17018-19
Optically Measured Microvascular Blood Flow Contrast of Malignant Breast Tumors Choe R et al. PLOS ONE 9, e99683 2014 http://dx.doi.org/10.1371/journal.pone.0099683
Opto-mechanical probe for combining atomic force microscopy and optical near-field surface analysis Van Hoorn, C.H. et al. Opt. Lett. 39, 4800-4803 2014 http://dx.doi.org/10.1364/OL.39.004800
π-Expanded Ketocoumarins as Efficient, Biocompatible Initiators for Two-Photon-Induced Polymerization Nazir, R. et al. Chem. Mater. 26, 3175 2014 http://dx.doi.org/10.1021/cm500612w
Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol Wabnitz H, et al. J. Biomed. Opt. 19, 086010 2014 http://dx.doi.org/10.1117/1.JBO.19.8.086010
Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol Wabnitz H, et al. J. Biomed. Opt. 19, 086012 2014 http://dx.doi.org/10.1117/1.JBO.19.8.086012
Phantoms for diffuse optical imaging based on totally absorbing objects, part 2: experimental implementation Martelli F, et al. J. Biomed. Opt. 19, 076011 2014 http://dx.doi.org/10.1117/1.JBO.19.7.076011
Phase control of femtosecond pulses on the nanoscale using second harmonic nanoparticles Accanto, N. et al. Light-Sci. Appl. 3, e143 2014 http://dx.doi.org/10.1038/lsa.2014.24
Polycarbonate Polymer Surface Modification by Extreme Ultraviolet (EUV) Radiation Ahad, I.U., B. Budner, B. Korczyc, H. Fiedorowicz, A. Bartnik, J. Kostecki, S. Burdyńska, D. Brabazon Acta Polonica Physica A 125, 924 2014 http://dx.doi.org/10.12693/APhysPolA.125.924
Protein DNA Interaction Measured with Ultra Fast Force Clamp Optical Tweezers Monico, C. et al. Biophys. J. 106, 21a 2014 http://dx.doi.org/10.1016/j.bpj.2013.11.171
Single-molecule evaluation of fluorescent protein photoactivation efficiency using an in vivo nanotemplate Durisic, N. et al. Nature Methods 11, 156-162 2014 http://dx.doi.org/10.1038/nmeth.2784
Speckle contrast optical spectroscopy, a non-invasive, diffuse optical method for measuring microvascular blood flow in tissue Valdes C P, H M Varma, A K Kristoffersen, T Dragojevic, J P Culver, and Durduran T Biomed. Opt. Express 5, 2769-84 2014 http://dx.doi.org/10.1364/BOE.5.002769
Speckle contrast optical tomography: A new method for deep tissue three-dimensional tomography of blood flow Varma M M, C P Valdes, A K Kristoffersen, J P Culver, and T Durduran Biomed. Opt. Express 5, 1275-1289 2014 http://dx.doi.org/10.1364/BOE.5.001275
The New Digital Pathology: Just Say NLO R. Cicchi Digest. Dis. Sci. 59, 1347–1348 2014 http://dx.doi.org/10.1007/s10620-014-3165-8
The transmembrane domain of N –acetylglucosaminyltransferase I is the key determinant for its Golgi subcompartmentation Schoberer, J. et al. Plant J. 80, 809–822 2014 http://dx.doi.org/10.1111/tpj.12671
Time domain functional NIRS imaging for human brain mapping. Torricelli, A., et al. Neuroimage 85, 28-50 2014 http://dx.doi.org/10.1016/j.neuroimage.2013.05.106
Time- and spectrally resolved characteristics of flavin fluorescence in U87MG cancer cells in culture Horilova, J. et al. J. Biomed. Opt. 20, 051017 2014 http://dx.doi.org/10.1117/1.JBO.20.5.051017
Time-resolved fluorescence monitoring of cholesterol in peripheral blood mononuclear cells Martinakova, Z. et al. Proc. SPIE 9441, 94411L 2014 http://dx.doi.org/10.1117/12.2074288
Tissue Fluorophores and Their Spectroscopic Characteristics Chorvatova A. and Chorvat D. Fluorescence Lifetime Spectroscopy and Imaging, 47-84 2015 http://dx.doi.org/10.1201/b17018-5
Transcranial, diffuse optical monitoring of micro-vascular cerebral hemodynamics after thrombolysis in ischemic stroke Zirak P, R Delgado-Mederos, L Dinia, D Carrera, J Martí-Fàbregas, and Durduran T J. Biomed. Opt. 19, 018002 2014 http://dx.doi.org/10.1117/1.JBO.19.1.018002
Two-photon fluorescence imaging with 30 fs laser system tunable around 1 micron Resan, B. et al. Opt. Express 22, 16456-16461 2014 http://dx.doi.org/10.1364/OE.22.016456
Ultra-fast optical manipulation of single proteins binding to the actin cytoskeleton Capitanio, M. et al. Proc. SPIE 8946, 89460K 2014 http://dx.doi.org/10.1117/12.2039219
Vectorial Nanoscale Mapping of Optical Antenna Fields by Single Molecule Dipoles Singh, A. et al. Nano Lett. 14, 4715 2014 http://dx.doi.org/10.1021/nl501819k