OPTBIO Publications

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Title	Author	Reference	Year	Publication Type
Combined non-linear laser imaging in cutaneous tumours: first experiences	De Giorgi, V., D. Massi, S. Sestini, R. Cicchi, F. S. Pavone, and T. Lotti	J. Eur. Acad. Dermatol. Venereol. 23, 314-316	2009	publication
Label-free in vivo brain imaging and targeted patch-clamp recording with third-harmonic generation microscopy	Witte, S. et al.	Proc Natl Acad Sci U S A, 108, 15, 5970-5975	2011	publication
Optical nanorod antennas modeled as cavities for dipolar emitters: evolution of sub- and super-radiant modes	Taminiau, T H, F D Stefani, N F Van Hulst	Nano Lett., 11 (3), pp 1020–1024	2011	publication
Monitoring of local pH in photodynamic therapy-treated live cancer cells using surface-enhanced Raman scattering probes	Bálint, Ś., S. Rao, M. Marro, P. Miškovsky, D Petrov	J. Raman Spectrosc., 42, 1215–1221	2011	publication
Multi-photon nanosurgery in live brain	Allegra Mascaro, A.L. , L. Sacconi, and F.S. Pavone	Frontiers in Neuroenergetics, 2, 21	2010	publication
Nonlinear Imaging of Tissues	Cicchi, R., L. Sacconi, F. S. Pavone	Handbook of Photonics for Biomedical Science, V. Tuchin (ed.) p. 509–545	2010	publication
3D ARTIFICIAL POLYMERIC SCAFFOLDS FOR STEM CELL GROWTH FABRICATED BY FEMTOSECOND LASER	Malinauskas, M. et al.	LITHUANIAN JOURNAL OF PHYSICS, 50, 1, 75-82	2010	publication
Real time imaging of femtosecond laser induced nano-neurosurgery dynamics in C. elegans	Mathew, M. et al.	Opt. Express, 18, 364-377	2010	publication
Estimating the helical pitch angle of amylopectin in starch using polarization second harmonic generation microscopy	Psilodimitrakopoulos, S. et al.	JOURNAL OF OPTICS, 12, 8, 084007	2010	publication
Tuning cell adhesion by controlling the roughness and wettability of 3D micro/nano silicon structures	Ranella, A. et al.	ACTA BIOMATERIALIA, 6, 7, 2711-2720	2010	publication
Silicon scaffolds promoting three-dimensional neuronal web of cytoplasmic processes	Papadopoulou, E. et al.	Tissue Eng Part C Methods 16 (3), 497-502	2010	publication
Combining optical tweezers, single-molecule fluorescence microscopy and microfluidics for studying reversible protein-DNA interactions	Gross, P., G. Farge, E.J.G. Peterman, G.J.L. Wuite	Methods in Enzymology, Volume 475: Single Molecule Tools, Part B: Super-Resolution, Particle Tracking, Multiparameter, and Force Based Methods, Walter, N (Ed.)....	2010	publication
Probing myosin structural conformation in vivo by second harmonic generation microscopy	Nucciotti, V., C. Stringari, L. Sacconi, F. Vanzi, L. Fusi, M. Linari, G. Piazzesi, V. Lombardi, F.S. Pavone	PNAS 107, 7763-7768	2010	publication
Rejection of transplanted hearts in patients evaluated by the component analysis of multi-wavelength NAD(P)H fluorescence lifetime spectroscopy	Chorvat D. et al.	Journal of Biophotonics, 3, 10-11, 646-652	2010	publication
Single DNA molecule detection in an optical trap using surface-enhanced Raman scattering	Rao, S., S. Raj, S. Balint, C. Fons, S. Campoy, M. Llagostera, D. Petrov	Appl. Phys. Lett. 96, 213701	2010	publication
Raman nanospectroscopy of single DNA molecules	Petrov, D.	Journal of NanoPhotonics, 4, 040306	2010	publication
Tip-enhanced Raman scattering enhancement from bridged nanocones	Rao, S., M. J. Huttunen, J. M. Kontio, J. Mäkitalo, Milla-Riina Viljanen, J. Simonen, M. Kauranen, D. Petrov	Optics Express 18, 23790	2010	publication
Electrophoretic mobility of a growing cell studied by photonic force microscope	Tonin, M., S. Balint, P. Mestres, I. A. Martinez, D. Petrov	Appl.Phys. Lett. 97, 203704	2010	publication
Diffusion and cellular uptake of drugs in live cells studied with surface-enhanced Raman scattering probes	Bálint, Š., S. Rao, M. Marro, V. Huntošová, P. Miškovský, D. Petrov	J. Biomed. Opt. 15, 027005	2010	publication
Third-harmonic generation for the study of Caenorhabditis elegans embryogenesis	Aviles-Espinosa, R., et al.	J. Biomed. Opt. 15, 046020	2010	publication
Unidirectional Emission of a Quantum Dot Coupled to a Nanoantenna	Curto, A. G., G. Volpe, T. H. Taminiau, M. P. Kreuzer, R. Quidant, and N. F. van Hulst	Science 329, 930-933	2010	publication
Fast image analysis in polarization SHG microscopy	Amat-Roldan, I., et al	Optics Express, 18, 16, 17209-17219	2010	publication
Real time imaging of femtosecond laser induced nano-neurosurgery dynamics in C. elegans	Santos, S. I. C. O., M. Mathew, and P. Loza-Alvarez	Optics Express, Vol. 18, Issue 1, pp. 364-377	2010	publication
Low power cw-laser signatures on human skin	Lihachev, A., J. Lesins, D. Jakovels, J. Spigulis	Quantum Electronics, 40 (12), 1077–1080	2010	publication
RGB imaging of laser-excited skin autofluorescence bleaching rates	Jakovels, D., J. Spigulis	Proc. of SPIE Vol. 7376 737618-1	2010	publication
Scoring of collagen organization in healthy and diseased human dermis by multiphoton microscopy	Cicchi, R., D. Kapsokalyvas, V. De Giorgi, V. Maio, A. Van Wiechen, D. Massi, T. Lotti, and F. S. Pavone	J. Biophoton. 3, 34-43	2010	publication
Multi-wavelength fluorescence lifetime spectroscopy: a new approach to the study of endogenous fluorescence in living cells and tissues	Chorvat, D; Chorvatova, A	LASER PHYSICS LETTERS, 6, 3, 175-193	2009	publication
2D and 3D biotin patterning by ultrafast lasers	Dinca, V, J Catherine, A Mourka, et al.	International Journal of Nanotechnology, 6, 88	2009	publication
Two-photon fabrication	Farsari, M., B.N. Chichkov	Nature Photonics 3, 450	2009	publication
In vivo polarization dependant Second and Third harmonic generation imaging of Caenorhabditis elegans pharyngeal muscles	Filippidis, G. et al	Laser Physics 19, 1475	2009	publication
In vivo imaging of cell morphology and cellular processes in Caenorhabditis elegans, using non-linear phenomena	Filippidis, G. et al	Micron, 40, 876	2009	publication
Second and third harmonic generation measurements of glues used for lining textile supports of painted artworks	Filippidis, G. et al	Analytical and Bioanalytical Chemistry, 395, 2161	2009	publication
Third-Harmonic Generation and Multi-Photon Excitation Fluorescence Imaging Microscopy Techniques for Online Art Conservation Diagnosis	Gualda, E.J. et al.	Applied Spectroscopy, 63, 280	2009	publication
Multimodal optical workstation for simultaneous linear, nonlinear microscopy and nanomanipulation: upgrading a commercial confocal inverted microscope.	Mathew, M. et al.	Rev. Sci. Instrum. 80, 073701	2009	publication
Shrinkage of microstructures produced by two-photon polymerization of Zr-based hybrid photosensitive materials	Ovsianikov, A. et al.	Optics Express, 17, 2143	2009	publication
Estimation of the effective orientation of the SHG source in primary cortical neurons	Psilodimitrakopoulos, S. et al.	Opt. Express, 17, 14418-14425	2009	publication
Quantitative discrimination between endogenous SHG sources in mammalian tissue, based on their polarization response	Psilodimitrakopoulos, S. et al.	Opt. Express 17, 10168-10176	2009	publication
In vivo, pixel-resolution mapping of thick filaments' orientation in nonfibrilar muscle using polarization-sensitive second harmonic generation microscopy.	Psilodimitrakopoulos, S. et al.	J. Biomed. Opt. 14, 014001	2009	publication
Imaging of laser-excited tissue autofluorescence bleaching rates	Spigulis, D., A. Lihachev, and R. Erts	Appl. Opt. 48, 10, D163-D168	2009	publication
Imaging of laser-excited tissue autofluorescence bleaching rates	Spigulis, J., A. Lihachev, and R. Erts	The Virtual Journal for Biomedical Optics, 4, 6	2009	publication
Tetramer opening in LacI-mediated DNA looping	Rutkauskas, D. et al.	Proc Natl Acad Sci U S A. 106(39), 16627-32	2009	publication
Laser-based micro/nanoengineering for biological applications	Stratakis, E. et al.	Progress in Quantum Electronics, 33, 127-164	2009	publication
Near-infrared photon time-of-flight spectroscopy of turbid materials up to 1400 nm	Svensson, T., et al.	Review of Scientific Instruments, 80, 063105	2009	publication
Dynamic position and force measurement for multiple optically trapped particles using a high-speed active pixel sensor	Towrie, M., et al.	Rev Sci Instrum. 80 (10),103704	2009	publication
An atomic force microscope operating at hypergravity for in situ measurement of cellular mechano-response	van Loon, J. J. W. A. , et al.	J. Microsc. 233, 234-243	2009	publication
Counting RAD51 proteins disassembling from nucleoprotein filaments under tension	Van Mameren, J. et al.	Nature, 457(7230), 745-8	2009	publication
Unraveling the structure of DNA during overstretching by using multicolor, single-molecule fluorescence imaging	Van Mameren, J. et al.	Proc Natl Acad Sci U S A, 106(43), 18231-6	2009	publication
Controlling the Optical Near Field of Nanoantennas with Spatial Phase-Shaped Beams	Volpe, G. et al.	Nano Lett. 9, 3608	2009	publication
Single-shot two-dimensional full-range optical coherence tomography achieved by dispersion control	Witte, S., M. Baclayon, E. J. Peterman, R. F. Toonen, H. D. Mansvelder, and M. L. Groot ,	Optics Express, 17 (14), 11335-11349	2009	publication
Three-Dimensional Biodegradable Structures Fabricated by Two-Photon Polymerization	Claeyssens, F. et al.	Langmuir 25, 3219-3223	2009	publication
Self-induced back-action optical trapping of dielectric nanoparticles	Juan, M.L., R. Gordon, Y. Pang, F. Eftekhari, R. Quidant	Nature Physics 5, 915 - 919	2009	publication
A femtosecond laser-induced two-photon photopolymerization technique for structuring microlenses	Malinauskas, M. et al.	J. Opt. 12 (2010) 035204	2009	publication
Simple Route for Preparing Optically Trappable Probes for Surface-Enhanced Raman Scattering	Balint, S., M. Kreuzer, S. Rao, G. Badenes, P. Miskovsky, D. Petrov	J. Phys. Chem. C, 113, 17724	2009	publication
MULTISPECTRAL UNMIXING OF FLUORESCENCE MOLECULAR TOMOGRAPHY DATA	Simantiraki, M., et al.	Journal of Innovative Optical Health Sciences (JIOHS), 2, 4, 353-364	2009	publication
Spectroscopic mode mapping of resonant plasmon nanoantennas	Ghenuche, P. et al.,	Phys. Rev. Lett., 101, 116805	2008	publication
In vivo imaging of neurodegeneration in Caenorhabditis elegans by third harmonic generation microscopy	GUALDA, E.J., G. FILIPPIDIS, M. MARI, G. VOGLIS, M. VLACHOS, C. FOTAKIS, N. TAVERNARAKIS	Journal of Microscopy, 232, 2, 270–275	2008	publication

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